﻿<?xml version='1.0' encoding='UTF-8'?><rss version="2.0" xmlns:dc="http://purl.org/dc/elements/1.1/"><channel><title>Micro Mart Forum / Micro Mart Folding Team / Micro Mart Forums  / The Purpose of Folding / Latest Posts</title><generator>InstantForum.NET v4.1.4</generator><description>Micro Mart Forum</description><link>http://forum.micromart.co.uk/</link><webMaster>forums@micromart.co.uk</webMaster><lastBuildDate>Fri, 21 Nov 2008 22:49:11 GMT</lastBuildDate><ttl>20</ttl><item><title>RE: The Purpose of Folding</title><link>http://forum.micromart.co.uk/Topic78050-52-1.aspx</link><description>Just to add to the excellent write up from Frosty, a pair of folding promo videos they often get the point over more powerfully and succinctly, than any amount of talking and badgering can ever do.&lt;P&gt;Chris&lt;/P&gt;&lt;P&gt;&lt;A href="http://fahwiki.net/index.php/Promotional_Stuff"&gt;http://fahwiki.net/index.php/Promotional_Stuff&lt;/A&gt;</description><pubDate>Mon, 30 Oct 2006 21:24:27 GMT</pubDate><dc:creator>spike09</dc:creator></item><item><title>The Purpose of Folding</title><link>http://forum.micromart.co.uk/Topic78050-52-1.aspx</link><description>&lt;TABLE width="100%" border=0&gt;&lt;TBODY&gt;&lt;TR&gt;&lt;TD vAlign=top align=left width="65%" height=501&gt;&lt;P&gt;&lt;B&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;What is protein folding and how is folding linked to disease? &lt;/FONT&gt;&lt;/B&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/science.html" target=_blank&gt;Proteins&lt;/A&gt; are biology's workhorses -- its "&lt;a target=_blank href="http://folding.stanford.edu/science.html#nano" target=_blank&gt;nanomachines&lt;/A&gt;." Before proteins can carry out these important functions, they assemble themselves, or "&lt;a target=_blank href="http://folding.stanford.edu/science.html#fold" target=_blank&gt;fold&lt;/A&gt;." The process of protein folding, while critical and fundamental to virtually all of biology, in many ways remains a mystery. &lt;BR&gt;&lt;BR&gt;Moreover, when proteins do not fold correctly (i.e. "misfold"), there can be serious consequences, including many well known &lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html" target=_blank&gt;diseases&lt;/A&gt;, such as &lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#AD" target=_blank&gt;Alzheimer's&lt;/A&gt;, Mad Cow (BSE), CJD, ALS, &lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#HD" target=_blank&gt;Huntington's&lt;/A&gt;&lt;/FONT&gt;, &lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#PD" target=_blank&gt;Parkinson's&lt;/A&gt;&lt;/FONT&gt; disease, and many &lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#Cancer" target=_blank&gt;Cancers&lt;/A&gt;&lt;/FONT&gt; and cancer-related syndromes.&lt;/FONT&gt;&lt;/P&gt;&lt;P&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;B&gt;You can help by simply running a piece of software. &lt;/B&gt;Folding@Home is a distributed computing project -- people from through out the world &lt;a target=_blank href="http://folding.stanford.edu/download.html" target=_blank&gt;&lt;STRONG&gt;download&lt;/STRONG&gt;&lt;/A&gt; and run software to band together to make one of the largest supercomputers in the world. Every computer makes the project closer to our goals. &lt;BR&gt;&lt;BR&gt;Folding@Home uses novel computational methods coupled to distributed computing, to simulate problems thousands to millions of times more challenging than previously achieved. &lt;BR&gt;&lt;BR&gt;&lt;/FONT&gt;&lt;/P&gt;&lt;/TD&gt;&lt;TD vAlign=center align=middle width="35%"&gt;&lt;TABLE width=258 align=right border=0&gt;&lt;TBODY&gt;&lt;TR&gt;&lt;TD vAlign=bottom borderColor=#000000 width=252 bgColor=#e0e0e0&gt;&lt;P class=style1&gt;&lt;STRONG&gt;CURRENT PROJECTS AND PROGRESS TO DATE: &lt;/STRONG&gt;&lt;/P&gt;&lt;UL&gt;&lt;LI&gt;&lt;FONT class=style2 face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#AD" target=_blank&gt;&lt;STRONG&gt;Alzheimer's Disease&lt;/STRONG&gt;&lt;/A&gt;&lt;/FONT&gt; &lt;LI&gt;&lt;STRONG&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#Cancer" target=_blank&gt;Cancer&lt;/A&gt;&lt;/FONT&gt;&lt;/STRONG&gt; &lt;LI&gt;&lt;STRONG&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#HD" target=_blank&gt;Huntington's Disease&lt;/A&gt;&lt;/FONT&gt;&lt;/STRONG&gt; &lt;LI&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#OI" target=_blank&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;STRONG&gt;Osteogenesis Imperfecta&lt;/STRONG&gt;&lt;/FONT&gt;&lt;/A&gt; &lt;LI&gt;&lt;STRONG&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#PD" target=_blank&gt;Parkinson's Disease&lt;/A&gt;&lt;/FONT&gt;&lt;/STRONG&gt; &lt;LI&gt;&lt;STRONG&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://folding.stanford.edu/FAQ-diseases.html#Ribo" target=_blank&gt;Ribosome &amp;amp; antibiotics &lt;/A&gt;&lt;/FONT&gt;&lt;/STRONG&gt;&lt;/LI&gt;&lt;/UL&gt;&lt;P align=center&gt;&lt;SPAN class=style1&gt;&lt;STRONG&gt;&lt;EM&gt;&lt;FONT face=Arial&gt;Your participation can help lead to a cure for these diseases. &lt;BR&gt;Click &lt;/FONT&gt;&lt;a target=_blank href="http://folding.stanford.edu/download.html" target=_blank&gt;&lt;FONT face=Arial&gt;here&lt;/FONT&gt;&lt;/A&gt;&lt;FONT face=Arial&gt; for free download.&lt;/FONT&gt;&lt;/EM&gt;&lt;/STRONG&gt;&lt;/SPAN&gt;&lt;/P&gt;&lt;/TD&gt;&lt;/TR&gt;&lt;TR&gt;&lt;TD&gt;&lt;P align=center&gt;&lt;BR&gt;&lt;FONT face=Arial&gt;&lt;IMG height=180 src="http://folding.stanford.edu/villin/villinanim.gif" width=180&gt;&lt;/FONT&gt;&lt;I&gt;&lt;a target=_blank href="http://folding.stanford.edu/results.html" target=_blank&gt;&lt;B&gt;&lt;BR&gt;&lt;FONT face=Arial&gt;Results&lt;/FONT&gt;&lt;/B&gt;&lt;/A&gt;&lt;FONT face=Arial&gt; &lt;STRONG&gt;from&lt;/STRONG&gt; &lt;/FONT&gt;&lt;B&gt;&lt;a target=_blank href="http://folding.stanford.edu/villin/index.html" target=_blank&gt;&lt;FONT face=Arial&gt;Folding@Home&lt;/FONT&gt;&lt;/A&gt;&lt;BR&gt;&lt;/B&gt;&lt;/I&gt;&lt;/P&gt;&lt;/TD&gt;&lt;/TR&gt;&lt;/TBODY&gt;&lt;/TABLE&gt;&lt;/TD&gt;&lt;/TR&gt;&lt;/TBODY&gt;&lt;/TABLE&gt;&lt;TABLE width="100%" border=0&gt;&lt;TBODY&gt;&lt;TR&gt;&lt;TD vAlign=top align=middle width="42%" height=234&gt;&lt;P align=left&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;B&gt;What have we done so far? &lt;/B&gt;We have had several successes. You can read about them on our &lt;a target=_blank href="http://folding.stanford.edu/science.html" target=_blank&gt;Science page&lt;/A&gt;, &lt;a target=_blank href="http://folding.stanford.edu/results.html" target=_blank&gt;Results section&lt;/A&gt;, or go directly to our &lt;a target=_blank href="http://folding.stanford.edu/papers.html" target=_blank&gt;press and papers page&lt;/A&gt;.&lt;/FONT&gt;&lt;/P&gt;&lt;P align=left&gt;&lt;B&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;Want to learn more? &lt;/FONT&gt;&lt;/B&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;Click on the links on the left for downloads or more information. You can also download our &lt;a target=_blank href="http://folding.stanford.edu/FoldingFAQ.pdf" target=_blank&gt;Executive Summary&lt;/A&gt;, which is a PDF suitable for distribution. Also, you can learn more by watching recent seminars (&lt;SPAN class=style1&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;&lt;a target=_blank href="http://irt-video.stanford.edu/ramgen/bmi/smil/bmi200-02-10-2005.smi" target=_blank&gt;Stanford BMI &lt;/A&gt;&lt;STRONG&gt;&lt;STRONG&gt;; &lt;/STRONG&gt;&lt;/STRONG&gt;&lt;a target=_blank href="http://murl.microsoft.com/videos/xerox/Forum2004/pande_OnDemand_100_100K_320x240.htm" target=_blank&gt;Xerox PARC&lt;/A&gt;). One can also help by &lt;a target=_blank href="http://folding.stanford.edu/donate/" target=_blank&gt;donating funds &lt;/A&gt;to the project, via Stanford University.&lt;BR&gt;&lt;BR&gt;&lt;/FONT&gt;&lt;/FONT&gt;&lt;/SPAN&gt;&lt;/FONT&gt;&lt;/P&gt;&lt;/TD&gt;&lt;TD vAlign=top align=middle width="58%" height=234&gt;&lt;P&gt;&lt;a target=_blank href="http://folding.stanford.edu/maps.html" target=_blank&gt;&lt;IMG src="http://fah-web.stanford.edu/maps/world2.png" border=0&gt;&lt;/A&gt;&lt;/P&gt;&lt;P&gt;&lt;I&gt;&lt;FONT face="Arial, Helvetica, sans-serif"&gt;Since October 1, 2000, over 1,000,000 CPUs &lt;a target=_blank href="http://folding.stanford.edu/maps.html" target=_blank&gt;throughout the world&lt;/A&gt; have participated in Folding@Home. Each additional CPU gives us an added boost in performance, allowing us to tackle more difficult problems or solve existing research faster or more accurately.&lt;/FONT&gt;&lt;/I&gt;&lt;/P&gt;&lt;/TD&gt;&lt;/TR&gt;&lt;/TBODY&gt;&lt;/TABLE&gt;&lt;P&gt; &lt;/P&gt;&lt;P&gt;The purpose of Folding as shown above, is to run computer simulations on proteins to extract data which can then be analysed and added to the university's extensive archives. The information gained through this process would take a much longer time if it was run solely on the resources available to Stanford University. By creating the Folding @ Home process however, it is possible for these simulations to be carried out on a global level, in essence using &lt;a target=_blank href="mailto:F@H" target=_blank&gt;F@H&lt;/A&gt; users as a giant supercomputer and cutting the processing time dramatically.&lt;/P&gt;&lt;P&gt;The program itself (in graphical form) is a 371kb file which doesn't take up much hdd space, the console client takes up even less 248kb.&lt;/P&gt;&lt;P&gt;Running &lt;a target=_blank href="mailto:F@H" target=_blank&gt;F@H&lt;/A&gt; takes very little setting up and only requires connection to upload results and download protein cores, all work is done offline and can use as much or as little, of the processing power you have available, as you wish, (specific non-deadline cores are used for slower cpu's or those only used at intervals).&lt;/P&gt;&lt;P&gt;For details on how to install the software, known issues and Linux installation, please read Tom Morton's thread here : &lt;a target=_blank href="http://forum.micromart.co.uk/shwmessage.aspx?ForumID=52&amp;amp;MessageID=76302" target=_blank&gt;http://forum.micromart.co.uk/shwmessage.aspx?ForumID=52&amp;amp;MessageID=76302&lt;/A&gt;&lt;/P&gt;&lt;P&gt;Thankyou for reading.&lt;/P&gt;&lt;P&gt;Join the MicroMart-UK folding team by using Team number 46590.&lt;/P&gt;</description><pubDate>Fri, 09 Dec 2005 19:49:07 GMT</pubDate><dc:creator>frosty15</dc:creator></item></channel></rss>